Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.93■■□□□ 1.42
Scn10aQ6QIY3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Gm42642-201ENSMUST00000200683 355 ntBASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.92■■□□□ 1.42
Scn10aQ6QIY3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Scn10aQ6QIY3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC23.91■■□□□ 1.42
Scn10aQ6QIY3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Scn10aQ6QIY3 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.91■■□□□ 1.42
Scn10aQ6QIY3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Scn10aQ6QIY3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Scn10aQ6QIY3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Scn10aQ6QIY3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
Scn10aQ6QIY3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Scn10aQ6QIY3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Scn10aQ6QIY3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Scn10aQ6QIY3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.89■■□□□ 1.41
Scn10aQ6QIY3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.89■■□□□ 1.41
Scn10aQ6QIY3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Scn10aQ6QIY3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Scn10aQ6QIY3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scn10aQ6QIY3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.88■■□□□ 1.41
Scn10aQ6QIY3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scn10aQ6QIY3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Scn10aQ6QIY3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scn10aQ6QIY3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Scn10aQ6QIY3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.87■■□□□ 1.41
Scn10aQ6QIY3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Scn10aQ6QIY3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn10aQ6QIY3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn10aQ6QIY3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Scn10aQ6QIY3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn10aQ6QIY3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Scn10aQ6QIY3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Scn10aQ6QIY3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn10aQ6QIY3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scn10aQ6QIY3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.85■■□□□ 1.41
Scn10aQ6QIY3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Scn10aQ6QIY3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Scn10aQ6QIY3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Scn10aQ6QIY3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scn10aQ6QIY3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scn10aQ6QIY3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scn10aQ6QIY3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scn10aQ6QIY3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Scn10aQ6QIY3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Scn10aQ6QIY3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.84■■□□□ 1.41
Scn10aQ6QIY3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.83■■□□□ 1.41
Scn10aQ6QIY3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scn10aQ6QIY3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Scn10aQ6QIY3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Scn10aQ6QIY3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.83■■□□□ 1.41
Scn10aQ6QIY3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Scn10aQ6QIY3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Scn10aQ6QIY3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Scn10aQ6QIY3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Scn10aQ6QIY3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Scn10aQ6QIY3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn10aQ6QIY3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Scn10aQ6QIY3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC23.8■■□□□ 1.4
Scn10aQ6QIY3 AV356131-201ENSMUST00000206201 750 ntBASIC23.8■■□□□ 1.4
Scn10aQ6QIY3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn10aQ6QIY3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Scn10aQ6QIY3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn10aQ6QIY3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.79■■□□□ 1.4
Scn10aQ6QIY3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn10aQ6QIY3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn10aQ6QIY3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn10aQ6QIY3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn10aQ6QIY3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn10aQ6QIY3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.78■■□□□ 1.4
Scn10aQ6QIY3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn10aQ6QIY3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Scn10aQ6QIY3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms