Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hif1aQ61221 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hif1aQ61221 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hif1aQ61221 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.7■□□□□ 0.91
Hif1aQ61221 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hif1aQ61221 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Hif1aQ61221 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hif1aQ61221 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Hif1aQ61221 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hif1aQ61221 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Hif1aQ61221 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hif1aQ61221 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hif1aQ61221 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.69■□□□□ 0.9
Hif1aQ61221 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hif1aQ61221 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.69■□□□□ 0.9
Hif1aQ61221 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hif1aQ61221 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hif1aQ61221 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hif1aQ61221 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.68■□□□□ 0.9
Hif1aQ61221 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hif1aQ61221 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.68■□□□□ 0.9
Hif1aQ61221 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hif1aQ61221 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hif1aQ61221 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hif1aQ61221 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.68■□□□□ 0.9
Hif1aQ61221 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hif1aQ61221 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hif1aQ61221 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hif1aQ61221 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hif1aQ61221 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hif1aQ61221 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hif1aQ61221 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hif1aQ61221 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hif1aQ61221 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hif1aQ61221 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hif1aQ61221 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hif1aQ61221 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hif1aQ61221 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hif1aQ61221 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hif1aQ61221 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hif1aQ61221 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hif1aQ61221 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hif1aQ61221 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hif1aQ61221 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.66■□□□□ 0.9
Hif1aQ61221 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hif1aQ61221 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hif1aQ61221 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hif1aQ61221 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hif1aQ61221 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hif1aQ61221 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hif1aQ61221 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hif1aQ61221 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hif1aQ61221 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.65■□□□□ 0.9
Hif1aQ61221 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hif1aQ61221 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hif1aQ61221 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Hif1aQ61221 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hif1aQ61221 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.64■□□□□ 0.89
Hif1aQ61221 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hif1aQ61221 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hif1aQ61221 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.64■□□□□ 0.89
Hif1aQ61221 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hif1aQ61221 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hif1aQ61221 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hif1aQ61221 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hif1aQ61221 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.63■□□□□ 0.89
Hif1aQ61221 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.63■□□□□ 0.89
Hif1aQ61221 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.63■□□□□ 0.89
Hif1aQ61221 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hif1aQ61221 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hif1aQ61221 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hif1aQ61221 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hif1aQ61221 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.62■□□□□ 0.89
Hif1aQ61221 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hif1aQ61221 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hif1aQ61221 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hif1aQ61221 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hif1aQ61221 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hif1aQ61221 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hif1aQ61221 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hif1aQ61221 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hif1aQ61221 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hif1aQ61221 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.61■□□□□ 0.89
Hif1aQ61221 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.61■□□□□ 0.89
Hif1aQ61221 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hif1aQ61221 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.61■□□□□ 0.89
Hif1aQ61221 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.6■□□□□ 0.89
Hif1aQ61221 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hif1aQ61221 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hif1aQ61221 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hif1aQ61221 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms