Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Foxf1Q61080 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Foxf1Q61080 Gm10399-202ENSMUST00000202768 748 ntBASIC17.21■□□□□ 0.35
Foxf1Q61080 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxf1Q61080 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxf1Q61080 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxf1Q61080 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Foxf1Q61080 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Foxf1Q61080 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Foxf1Q61080 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Foxf1Q61080 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxf1Q61080 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxf1Q61080 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxf1Q61080 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxf1Q61080 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxf1Q61080 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Foxf1Q61080 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.19■□□□□ 0.34
Foxf1Q61080 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.19■□□□□ 0.34
Foxf1Q61080 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxf1Q61080 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxf1Q61080 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.18■□□□□ 0.34
Foxf1Q61080 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxf1Q61080 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.18■□□□□ 0.34
Foxf1Q61080 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Foxf1Q61080 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxf1Q61080 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxf1Q61080 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxf1Q61080 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.18■□□□□ 0.34
Foxf1Q61080 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxf1Q61080 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxf1Q61080 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxf1Q61080 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxf1Q61080 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxf1Q61080 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.17■□□□□ 0.34
Foxf1Q61080 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxf1Q61080 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Foxf1Q61080 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Foxf1Q61080 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Foxf1Q61080 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxf1Q61080 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Foxf1Q61080 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxf1Q61080 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.16■□□□□ 0.34
Foxf1Q61080 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.16■□□□□ 0.34
Foxf1Q61080 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxf1Q61080 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxf1Q61080 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.16■□□□□ 0.34
Foxf1Q61080 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxf1Q61080 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxf1Q61080 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Foxf1Q61080 Gm15546-201ENSMUST00000122095 826 ntBASIC17.15■□□□□ 0.34
Foxf1Q61080 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.15■□□□□ 0.34
Foxf1Q61080 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.15■□□□□ 0.34
Foxf1Q61080 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxf1Q61080 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Foxf1Q61080 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxf1Q61080 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxf1Q61080 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
Foxf1Q61080 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.14■□□□□ 0.33
Foxf1Q61080 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.14■□□□□ 0.33
Foxf1Q61080 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxf1Q61080 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Foxf1Q61080 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Foxf1Q61080 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxf1Q61080 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxf1Q61080 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxf1Q61080 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxf1Q61080 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Foxf1Q61080 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxf1Q61080 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxf1Q61080 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxf1Q61080 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxf1Q61080 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.12■□□□□ 0.33
Foxf1Q61080 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.12■□□□□ 0.33
Foxf1Q61080 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxf1Q61080 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxf1Q61080 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Foxf1Q61080 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxf1Q61080 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms