Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.82■■□□□ 1.08
Ctc1Q5SUQ9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctc1Q5SUQ9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctc1Q5SUQ9 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.82■■□□□ 1.08
Ctc1Q5SUQ9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ctc1Q5SUQ9 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ctc1Q5SUQ9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ctc1Q5SUQ9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctc1Q5SUQ9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctc1Q5SUQ9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctc1Q5SUQ9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ctc1Q5SUQ9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ctc1Q5SUQ9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ctc1Q5SUQ9 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.78■■□□□ 1.08
Ctc1Q5SUQ9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ctc1Q5SUQ9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 Gm21956-201ENSMUST00000179946 522 ntBASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctc1Q5SUQ9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ctc1Q5SUQ9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.77■■□□□ 1.07
Ctc1Q5SUQ9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Gm12922-201ENSMUST00000120626 809 ntBASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ctc1Q5SUQ9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctc1Q5SUQ9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ctc1Q5SUQ9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ctc1Q5SUQ9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ctc1Q5SUQ9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ctc1Q5SUQ9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ctc1Q5SUQ9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ctc1Q5SUQ9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ctc1Q5SUQ9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ctc1Q5SUQ9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Ctc1Q5SUQ9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ctc1Q5SUQ9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.72■■□□□ 1.07
Ctc1Q5SUQ9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.72■■□□□ 1.07
Ctc1Q5SUQ9 Gm10399-202ENSMUST00000202768 748 ntBASIC21.72■■□□□ 1.07
Ctc1Q5SUQ9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.72■■□□□ 1.07
Ctc1Q5SUQ9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.72■■□□□ 1.07
Ctc1Q5SUQ9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ctc1Q5SUQ9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ctc1Q5SUQ9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Ctc1Q5SUQ9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ctc1Q5SUQ9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ctc1Q5SUQ9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.71■■□□□ 1.07
Ctc1Q5SUQ9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ctc1Q5SUQ9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ctc1Q5SUQ9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ctc1Q5SUQ9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ctc1Q5SUQ9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ctc1Q5SUQ9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ctc1Q5SUQ9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ctc1Q5SUQ9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ctc1Q5SUQ9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ctc1Q5SUQ9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ctc1Q5SUQ9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms