Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SgcbP82349 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SgcbP82349 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcbP82349 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SgcbP82349 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcbP82349 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
SgcbP82349 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SgcbP82349 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcbP82349 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcbP82349 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SgcbP82349 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SgcbP82349 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcbP82349 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcbP82349 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.28■□□□□ 0.52
SgcbP82349 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.28■□□□□ 0.52
SgcbP82349 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SgcbP82349 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SgcbP82349 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SgcbP82349 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.28■□□□□ 0.52
SgcbP82349 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SgcbP82349 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
SgcbP82349 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SgcbP82349 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SgcbP82349 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SgcbP82349 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.27■□□□□ 0.52
SgcbP82349 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SgcbP82349 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.27■□□□□ 0.52
SgcbP82349 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SgcbP82349 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcbP82349 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcbP82349 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SgcbP82349 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcbP82349 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.26■□□□□ 0.51
SgcbP82349 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
SgcbP82349 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcbP82349 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SgcbP82349 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcbP82349 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcbP82349 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.26■□□□□ 0.51
SgcbP82349 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcbP82349 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcbP82349 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
SgcbP82349 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcbP82349 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcbP82349 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcbP82349 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.24■□□□□ 0.51
SgcbP82349 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SgcbP82349 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SgcbP82349 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SgcbP82349 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.24■□□□□ 0.51
SgcbP82349 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcbP82349 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcbP82349 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
SgcbP82349 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SgcbP82349 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SgcbP82349 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.23■□□□□ 0.51
SgcbP82349 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.23■□□□□ 0.51
SgcbP82349 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcbP82349 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcbP82349 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcbP82349 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcbP82349 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcbP82349 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SgcbP82349 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcbP82349 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcbP82349 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SgcbP82349 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcbP82349 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcbP82349 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcbP82349 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.22■□□□□ 0.51
SgcbP82349 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SgcbP82349 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SgcbP82349 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcbP82349 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SgcbP82349 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
SgcbP82349 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcbP82349 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.21■□□□□ 0.51
SgcbP82349 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcbP82349 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcbP82349 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.21■□□□□ 0.51
SgcbP82349 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SgcbP82349 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.21■□□□□ 0.51
SgcbP82349 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.21■□□□□ 0.51
SgcbP82349 Gm9847-201ENSMUST00000052528 599 ntBASIC18.21■□□□□ 0.51
SgcbP82349 Gm9870-201ENSMUST00000063874 645 ntBASIC18.21■□□□□ 0.51
SgcbP82349 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcbP82349 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.21■□□□□ 0.51
SgcbP82349 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
SgcbP82349 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
SgcbP82349 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcbP82349 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms