Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Abcd3P55096 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.41■□□□□ 0.54
Abcd3P55096 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.41■□□□□ 0.54
Abcd3P55096 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd3P55096 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.4■□□□□ 0.54
Abcd3P55096 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd3P55096 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd3P55096 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd3P55096 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd3P55096 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd3P55096 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Abcd3P55096 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd3P55096 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Abcd3P55096 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd3P55096 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd3P55096 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd3P55096 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.39■□□□□ 0.53
Abcd3P55096 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd3P55096 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd3P55096 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd3P55096 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.39■□□□□ 0.53
Abcd3P55096 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Abcd3P55096 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd3P55096 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Abcd3P55096 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd3P55096 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Abcd3P55096 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Abcd3P55096 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd3P55096 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd3P55096 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd3P55096 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd3P55096 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Abcd3P55096 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Abcd3P55096 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.38■□□□□ 0.53
Abcd3P55096 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd3P55096 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd3P55096 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd3P55096 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd3P55096 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd3P55096 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.37■□□□□ 0.53
Abcd3P55096 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Abcd3P55096 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd3P55096 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd3P55096 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd3P55096 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd3P55096 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.36■□□□□ 0.53
Abcd3P55096 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Abcd3P55096 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.36■□□□□ 0.53
Abcd3P55096 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcd3P55096 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcd3P55096 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Abcd3P55096 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Abcd3P55096 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcd3P55096 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.35■□□□□ 0.53
Abcd3P55096 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcd3P55096 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.35■□□□□ 0.53
Abcd3P55096 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcd3P55096 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.35■□□□□ 0.53
Abcd3P55096 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcd3P55096 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcd3P55096 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcd3P55096 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Abcd3P55096 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcd3P55096 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Abcd3P55096 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcd3P55096 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Abcd3P55096 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Abcd3P55096 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
Abcd3P55096 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Abcd3P55096 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Abcd3P55096 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Abcd3P55096 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Abcd3P55096 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.33■□□□□ 0.53
Abcd3P55096 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd3P55096 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd3P55096 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.33■□□□□ 0.52
Abcd3P55096 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd3P55096 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd3P55096 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd3P55096 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Abcd3P55096 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd3P55096 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd3P55096 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Abcd3P55096 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.32■□□□□ 0.52
Abcd3P55096 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd3P55096 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd3P55096 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.32■□□□□ 0.52
Abcd3P55096 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd3P55096 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd3P55096 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd3P55096 Gm40881-201ENSMUST00000223397 166 ntBASIC18.31■□□□□ 0.52
Abcd3P55096 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd3P55096 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd3P55096 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Abcd3P55096 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd3P55096 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd3P55096 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Abcd3P55096 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.3■□□□□ 0.52
Abcd3P55096 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.3■□□□□ 0.52
Abcd3P55096 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms