Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Limk1P53668 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Limk1P53668 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Limk1P53668 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Limk1P53668 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Limk1P53668 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Limk1P53668 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.19■□□□□ 0.82
Limk1P53668 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Limk1P53668 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.18■□□□□ 0.82
Limk1P53668 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.18■□□□□ 0.82
Limk1P53668 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Limk1P53668 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Limk1P53668 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.18■□□□□ 0.82
Limk1P53668 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Limk1P53668 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Limk1P53668 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Limk1P53668 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Limk1P53668 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.17■□□□□ 0.82
Limk1P53668 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Limk1P53668 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Limk1P53668 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.17■□□□□ 0.82
Limk1P53668 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Limk1P53668 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Limk1P53668 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.16■□□□□ 0.82
Limk1P53668 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Limk1P53668 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Limk1P53668 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.15■□□□□ 0.82
Limk1P53668 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Limk1P53668 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Limk1P53668 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Limk1P53668 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.15■□□□□ 0.82
Limk1P53668 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Limk1P53668 Gm42642-201ENSMUST00000200683 355 ntBASIC20.15■□□□□ 0.82
Limk1P53668 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.15■□□□□ 0.82
Limk1P53668 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Limk1P53668 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Limk1P53668 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Limk1P53668 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Limk1P53668 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.14■□□□□ 0.81
Limk1P53668 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.14■□□□□ 0.81
Limk1P53668 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.14■□□□□ 0.81
Limk1P53668 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Limk1P53668 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Limk1P53668 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Limk1P53668 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Limk1P53668 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Limk1P53668 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Limk1P53668 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Limk1P53668 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Limk1P53668 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Limk1P53668 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Limk1P53668 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Limk1P53668 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.12■□□□□ 0.81
Limk1P53668 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Limk1P53668 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Limk1P53668 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Limk1P53668 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Limk1P53668 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Limk1P53668 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Limk1P53668 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Limk1P53668 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Limk1P53668 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Limk1P53668 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Limk1P53668 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Limk1P53668 Gm26833-201ENSMUST00000180899 440 ntBASIC20.11■□□□□ 0.81
Limk1P53668 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.11■□□□□ 0.81
Limk1P53668 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.11■□□□□ 0.81
Limk1P53668 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.11■□□□□ 0.81
Limk1P53668 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Limk1P53668 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.11■□□□□ 0.81
Limk1P53668 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Limk1P53668 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Limk1P53668 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Limk1P53668 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Limk1P53668 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Limk1P53668 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Limk1P53668 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Limk1P53668 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.1■□□□□ 0.81
Limk1P53668 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Limk1P53668 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Limk1P53668 Gm43060-201ENSMUST00000200621 289 ntBASIC20.1■□□□□ 0.81
Limk1P53668 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Limk1P53668 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.1■□□□□ 0.81
Limk1P53668 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Limk1P53668 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.09■□□□□ 0.81
Limk1P53668 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Limk1P53668 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.09■□□□□ 0.81
Limk1P53668 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Limk1P53668 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Limk1P53668 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Limk1P53668 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Limk1P53668 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Limk1P53668 Gm12251-201ENSMUST00000117893 792 ntBASIC20.08■□□□□ 0.81
Limk1P53668 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.08■□□□□ 0.81
Limk1P53668 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Limk1P53668 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Limk1P53668 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Limk1P53668 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Limk1P53668 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Limk1P53668 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms