Protein–RNA interactions for Protein: P47741

Tnfrsf4, Tumor necrosis factor receptor superfamily member 4, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf4P47741 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf4P47741 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf4P47741 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf4P47741 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.87■□□□□ 0.93
Tnfrsf4P47741 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.87■□□□□ 0.93
Tnfrsf4P47741 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.87■□□□□ 0.93
Tnfrsf4P47741 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf4P47741 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf4P47741 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Gm27405-201ENSMUST00000184201 112 ntBASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Gm42569-201ENSMUST00000200539 472 ntBASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Gm42642-201ENSMUST00000200683 355 ntBASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf4P47741 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf4P47741 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf4P47741 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf4P47741 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.84■□□□□ 0.93
Tnfrsf4P47741 Gm26571-201ENSMUST00000181399 666 ntBASIC20.84■□□□□ 0.93
Tnfrsf4P47741 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.84■□□□□ 0.93
Tnfrsf4P47741 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.84■□□□□ 0.93
Tnfrsf4P47741 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.84■□□□□ 0.93
Tnfrsf4P47741 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Tnfrsf4P47741 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf4P47741 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.83■□□□□ 0.93
Tnfrsf4P47741 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf4P47741 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf4P47741 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf4P47741 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.83■□□□□ 0.93
Tnfrsf4P47741 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfrsf4P47741 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf4P47741 Smad6-203ENSMUST00000179458 273 ntBASIC20.82■□□□□ 0.92
Tnfrsf4P47741 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.82■□□□□ 0.92
Tnfrsf4P47741 Gm40848-201ENSMUST00000221998 324 ntBASIC20.82■□□□□ 0.92
Tnfrsf4P47741 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf4P47741 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf4P47741 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf4P47741 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf4P47741 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf4P47741 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf4P47741 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf4P47741 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf4P47741 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf4P47741 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.8■□□□□ 0.92
Tnfrsf4P47741 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.8■□□□□ 0.92
Tnfrsf4P47741 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf4P47741 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf4P47741 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.79■□□□□ 0.92
Tnfrsf4P47741 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf4P47741 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf4P47741 Gm10849-201ENSMUST00000100397 618 ntBASIC20.79■□□□□ 0.92
Tnfrsf4P47741 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf4P47741 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf4P47741 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tnfrsf4P47741 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Tnfrsf4P47741 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf4P47741 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.78■□□□□ 0.92
Tnfrsf4P47741 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf4P47741 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf4P47741 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms