Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hmgn1P18608 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn1P18608 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn1P18608 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn1P18608 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.83■□□□□ 0.6
Hmgn1P18608 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.83■□□□□ 0.6
Hmgn1P18608 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.82■□□□□ 0.6
Hmgn1P18608 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Hmgn1P18608 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn1P18608 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn1P18608 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn1P18608 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn1P18608 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn1P18608 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn1P18608 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn1P18608 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.81■□□□□ 0.6
Hmgn1P18608 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn1P18608 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn1P18608 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn1P18608 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmgn1P18608 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn1P18608 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn1P18608 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn1P18608 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn1P18608 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn1P18608 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn1P18608 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmgn1P18608 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn1P18608 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn1P18608 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn1P18608 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn1P18608 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hmgn1P18608 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn1P18608 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hmgn1P18608 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.77■□□□□ 0.6
Hmgn1P18608 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.77■□□□□ 0.6
Hmgn1P18608 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn1P18608 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn1P18608 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn1P18608 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn1P18608 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hmgn1P18608 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn1P18608 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn1P18608 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hmgn1P18608 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hmgn1P18608 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn1P18608 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgn1P18608 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn1P18608 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgn1P18608 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn1P18608 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn1P18608 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn1P18608 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn1P18608 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hmgn1P18608 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn1P18608 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.75■□□□□ 0.59
Hmgn1P18608 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn1P18608 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn1P18608 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgn1P18608 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hmgn1P18608 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn1P18608 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.74■□□□□ 0.59
Hmgn1P18608 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn1P18608 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn1P18608 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hmgn1P18608 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn1P18608 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn1P18608 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn1P18608 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgn1P18608 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn1P18608 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn1P18608 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn1P18608 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hmgn1P18608 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Hmgn1P18608 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hmgn1P18608 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn1P18608 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn1P18608 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn1P18608 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgn1P18608 Gm14523-201ENSMUST00000117260 558 ntBASIC18.72■□□□□ 0.59
Hmgn1P18608 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.72■□□□□ 0.59
Hmgn1P18608 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.72■□□□□ 0.59
Hmgn1P18608 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgn1P18608 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgn1P18608 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgn1P18608 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgn1P18608 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Hmgn1P18608 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgn1P18608 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms