Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.41■□□□□ 0.7
Krt1P04104 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt1P04104 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt1P04104 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Krt1P04104 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt1P04104 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt1P04104 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Krt1P04104 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Krt1P04104 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.4■□□□□ 0.7
Krt1P04104 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt1P04104 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt1P04104 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Krt1P04104 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.4■□□□□ 0.7
Krt1P04104 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Krt1P04104 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Krt1P04104 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
Krt1P04104 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Krt1P04104 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Krt1P04104 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Krt1P04104 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt1P04104 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.38■□□□□ 0.69
Krt1P04104 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.38■□□□□ 0.69
Krt1P04104 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt1P04104 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt1P04104 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt1P04104 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt1P04104 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt1P04104 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Krt1P04104 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt1P04104 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Krt1P04104 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Krt1P04104 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt1P04104 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Krt1P04104 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt1P04104 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt1P04104 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.37■□□□□ 0.69
Krt1P04104 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt1P04104 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt1P04104 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt1P04104 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Krt1P04104 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 Gm45364-201ENSMUST00000210883 159 ntBASIC19.36■□□□□ 0.69
Krt1P04104 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.36■□□□□ 0.69
Krt1P04104 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.36■□□□□ 0.69
Krt1P04104 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.36■□□□□ 0.69
Krt1P04104 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt1P04104 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt1P04104 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Krt1P04104 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt1P04104 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt1P04104 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt1P04104 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Krt1P04104 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.35■□□□□ 0.69
Krt1P04104 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt1P04104 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt1P04104 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt1P04104 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt1P04104 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.34■□□□□ 0.69
Krt1P04104 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Krt1P04104 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.34■□□□□ 0.69
Krt1P04104 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.34■□□□□ 0.69
Krt1P04104 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Krt1P04104 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.34■□□□□ 0.69
Krt1P04104 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Krt1P04104 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt1P04104 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Krt1P04104 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms