Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Shank1D3YZU1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Shank1D3YZU1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shank1D3YZU1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shank1D3YZU1 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.46■□□□□ 0.55
Shank1D3YZU1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Shank1D3YZU1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.46■□□□□ 0.55
Shank1D3YZU1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.54
Shank1D3YZU1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shank1D3YZU1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shank1D3YZU1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shank1D3YZU1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Shank1D3YZU1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shank1D3YZU1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Shank1D3YZU1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shank1D3YZU1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Shank1D3YZU1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shank1D3YZU1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shank1D3YZU1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shank1D3YZU1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Shank1D3YZU1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Shank1D3YZU1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank1D3YZU1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank1D3YZU1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank1D3YZU1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Shank1D3YZU1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank1D3YZU1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank1D3YZU1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shank1D3YZU1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank1D3YZU1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank1D3YZU1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank1D3YZU1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Shank1D3YZU1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank1D3YZU1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank1D3YZU1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank1D3YZU1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank1D3YZU1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.41■□□□□ 0.54
Shank1D3YZU1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.41■□□□□ 0.54
Shank1D3YZU1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.4■□□□□ 0.54
Shank1D3YZU1 Gm43530-201ENSMUST00000195920 274 ntBASIC18.4■□□□□ 0.54
Shank1D3YZU1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.4■□□□□ 0.54
Shank1D3YZU1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.39■□□□□ 0.53
Shank1D3YZU1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.39■□□□□ 0.53
Shank1D3YZU1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank1D3YZU1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank1D3YZU1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank1D3YZU1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank1D3YZU1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shank1D3YZU1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank1D3YZU1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank1D3YZU1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shank1D3YZU1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shank1D3YZU1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.38■□□□□ 0.53
Shank1D3YZU1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank1D3YZU1 Smad6-203ENSMUST00000179458 273 ntBASIC18.38■□□□□ 0.53
Shank1D3YZU1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.38■□□□□ 0.53
Shank1D3YZU1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank1D3YZU1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shank1D3YZU1 AV356131-201ENSMUST00000206201 750 ntBASIC18.37■□□□□ 0.53
Shank1D3YZU1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.37■□□□□ 0.53
Shank1D3YZU1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank1D3YZU1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank1D3YZU1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank1D3YZU1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank1D3YZU1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shank1D3YZU1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank1D3YZU1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.36■□□□□ 0.53
Shank1D3YZU1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.36■□□□□ 0.53
Shank1D3YZU1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank1D3YZU1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Shank1D3YZU1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shank1D3YZU1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.35■□□□□ 0.53
Shank1D3YZU1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shank1D3YZU1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Shank1D3YZU1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank1D3YZU1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank1D3YZU1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shank1D3YZU1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank1D3YZU1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank1D3YZU1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shank1D3YZU1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms