Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv2A0A0B4J1G8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv2A0A0B4J1G8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.27■□□□□ 0.52
Trbv2A0A0B4J1G8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv2A0A0B4J1G8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv2A0A0B4J1G8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv2A0A0B4J1G8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Trbv2A0A0B4J1G8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv2A0A0B4J1G8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.26■□□□□ 0.51
Trbv2A0A0B4J1G8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trbv2A0A0B4J1G8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 Golph3-202ENSMUST00000226517 2359 ntBASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Trbv2A0A0B4J1G8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv2A0A0B4J1G8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv2A0A0B4J1G8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv2A0A0B4J1G8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv2A0A0B4J1G8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv2A0A0B4J1G8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv2A0A0B4J1G8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Trbv2A0A0B4J1G8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv2A0A0B4J1G8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv2A0A0B4J1G8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv2A0A0B4J1G8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv2A0A0B4J1G8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv2A0A0B4J1G8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trbv2A0A0B4J1G8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv2A0A0B4J1G8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv2A0A0B4J1G8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv2A0A0B4J1G8 Iqck-206ENSMUST00000208658 2891 ntBASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv2A0A0B4J1G8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Gm14523-201ENSMUST00000117260 558 ntBASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv2A0A0B4J1G8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms