Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Gm11500-201ENSMUST00000118237 601 ntBASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn8aQ9WTU3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm15782-201ENSMUST00000121073 445 ntBASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm44158-201ENSMUST00000203881 505 ntBASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm44545-201ENSMUST00000208262 746 ntBASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.79□□□□□ -0.52
Scn8aQ9WTU3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms