Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm14017-201ENSMUST00000121934 386 ntBASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Gm9230-201ENSMUST00000188228 532 ntBASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Gm32999-201ENSMUST00000192693 562 ntBASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Gm45598-202ENSMUST00000210719 986 ntBASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim3Q9R1R2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Gm13996-201ENSMUST00000118456 430 ntBASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Gm12997-201ENSMUST00000120207 640 ntBASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Gm45224-201ENSMUST00000208203 414 ntBASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.13□□□□□ -0.63
Trim3Q9R1R2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim3Q9R1R2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Gm44262-201ENSMUST00000204969 372 ntBASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Gm18212-201ENSMUST00000211678 889 ntBASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim3Q9R1R2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms