Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ercc4Q9QZD4 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ercc4Q9QZD4 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm6963-201ENSMUST00000147879 379 ntBASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm43630-201ENSMUST00000201550 776 ntBASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm45865-201ENSMUST00000211815 945 ntBASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.77□□□□□ -0.37
Ercc4Q9QZD4 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Gm3096-201ENSMUST00000185770 364 ntBASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Gm31256-201ENSMUST00000194705 506 ntBASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ercc4Q9QZD4 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms