Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.74□□□□□ -0.53
Tubb3Q9ERD7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm7857-201ENSMUST00000117957 358 ntBASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm12217-201ENSMUST00000118858 696 ntBASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm28450-201ENSMUST00000187349 638 ntBASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm45433-201ENSMUST00000209386 247 ntBASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tubb3Q9ERD7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Gm4909-201ENSMUST00000118749 794 ntBASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Gm9230-201ENSMUST00000188228 532 ntBASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Gm17812-201ENSMUST00000204935 318 ntBASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms