Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Gm2260-201ENSMUST00000184965 657 ntBASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gm9192-201ENSMUST00000183221 985 ntBASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gm7003-201ENSMUST00000195089 312 ntBASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Mir433-201ENSMUST00000093564 124 ntBASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpa3Q9CQ71 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Gm14208-201ENSMUST00000119645 678 ntBASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Gm14277-201ENSMUST00000121195 360 ntBASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Gm9797-202ENSMUST00000218003 294 ntBASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Gm807-202ENSMUST00000224929 408 ntBASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rpa3Q9CQ71 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms