Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm16505-201ENSMUST00000179981 232 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm28450-201ENSMUST00000187349 638 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm4607-201ENSMUST00000206649 577 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm4157-201ENSMUST00000211647 679 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm270-201ENSMUST00000223010 976 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Gm26286-201ENSMUST00000104166 134 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Gm4909-201ENSMUST00000118749 794 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Gm12380-201ENSMUST00000119012 544 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Gm14441-201ENSMUST00000121960 540 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Gm8343-201ENSMUST00000182705 994 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdha3Q91Y16 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Gm15711-201ENSMUST00000118889 535 ntBASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdha3Q91Y16 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms