Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdha8Q91Y12 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm25890-201ENSMUST00000177643 165 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm22614-201ENSMUST00000178300 165 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm8956-201ENSMUST00000203939 825 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm44967-201ENSMUST00000207047 631 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm22042-201ENSMUST00000082989 165 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm26110-201ENSMUST00000083971 165 ntBASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdha8Q91Y12 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Gm17376-201ENSMUST00000166016 84 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Gm25700-201ENSMUST00000177693 110 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Gm9136-201ENSMUST00000193368 454 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Gm4607-201ENSMUST00000206649 577 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Gm6082-201ENSMUST00000215204 454 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdha8Q91Y12 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdha8Q91Y12 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdha8Q91Y12 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms