Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm23680-201ENSMUST00000083162 164 ntBASIC13.48□□□□□ -0.25
Trex1Q91XB0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.47□□□□□ -0.25
Trex1Q91XB0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Gm12247-201ENSMUST00000117585 670 ntBASIC13.47□□□□□ -0.25
Trex1Q91XB0 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.47□□□□□ -0.25
Trex1Q91XB0 Gm11960-201ENSMUST00000122068 925 ntBASIC13.47□□□□□ -0.25
Trex1Q91XB0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Gm7741-201ENSMUST00000181445 989 ntBASIC13.47□□□□□ -0.25
Trex1Q91XB0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.47□□□□□ -0.25
Trex1Q91XB0 Gm25517-201ENSMUST00000083865 134 ntBASIC13.47□□□□□ -0.25
Trex1Q91XB0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Trex1Q91XB0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.46□□□□□ -0.25
Trex1Q91XB0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.46□□□□□ -0.25
Trex1Q91XB0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.46□□□□□ -0.25
Trex1Q91XB0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.46□□□□□ -0.25
Trex1Q91XB0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Gm29410-201ENSMUST00000188383 694 ntBASIC13.46□□□□□ -0.25
Trex1Q91XB0 Gm19091-201ENSMUST00000208120 978 ntBASIC13.46□□□□□ -0.25
Trex1Q91XB0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trex1Q91XB0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trex1Q91XB0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trex1Q91XB0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trex1Q91XB0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trex1Q91XB0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.46□□□□□ -0.26
Trex1Q91XB0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trex1Q91XB0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.46□□□□□ -0.26
Trex1Q91XB0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trex1Q91XB0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trex1Q91XB0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trex1Q91XB0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trex1Q91XB0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trex1Q91XB0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trex1Q91XB0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trex1Q91XB0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trex1Q91XB0 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.45□□□□□ -0.26
Trex1Q91XB0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.45□□□□□ -0.26
Trex1Q91XB0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trex1Q91XB0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trex1Q91XB0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trex1Q91XB0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trex1Q91XB0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trex1Q91XB0 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.45□□□□□ -0.26
Trex1Q91XB0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms