Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm32999-201ENSMUST00000192693 562 ntBASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm6334-201ENSMUST00000207083 228 ntBASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.81□□□□□ -0.52
Vps39Q8R5L3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm27516-201ENSMUST00000184237 98 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm8885-201ENSMUST00000189382 598 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm4607-201ENSMUST00000206649 577 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm44651-201ENSMUST00000207343 372 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm5455-201ENSMUST00000058710 715 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vps39Q8R5L3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps39Q8R5L3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms