Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm29127-201ENSMUST00000188304 517 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm8762-201ENSMUST00000193486 339 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm19994-201ENSMUST00000217086 586 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.6□□□□□ -0.87
Nup35Q8R4R6 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nup35Q8R4R6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm4780-202ENSMUST00000215200 2644 ntBASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm11960-201ENSMUST00000122068 925 ntBASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.59□□□□□ -0.87
Nup35Q8R4R6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm18893-201ENSMUST00000198416 943 ntBASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.59□□□□□ -0.87
Nup35Q8R4R6 AC158982.1-201ENSMUST00000228377 901 ntBASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Nup35Q8R4R6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Nup35Q8R4R6 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms