Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm18827-201ENSMUST00000188341 790 ntBASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm37259-201ENSMUST00000193903 849 ntBASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm9257-201ENSMUST00000221254 232 ntBASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc87Q8CDL9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gm25214-201ENSMUST00000104573 129 ntBASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gm14441-201ENSMUST00000121960 540 ntBASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gm26083-201ENSMUST00000157904 193 ntBASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gm25043-201ENSMUST00000158604 212 ntBASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc87Q8CDL9 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc87Q8CDL9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms