Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.15□□□□□ -0.46
Trub1Q8C0D0 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trub1Q8C0D0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.15□□□□□ -0.47
Trub1Q8C0D0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trub1Q8C0D0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.15□□□□□ -0.47
Trub1Q8C0D0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trub1Q8C0D0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Gm28686-201ENSMUST00000187404 609 ntBASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Gm807-202ENSMUST00000224929 408 ntBASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Lect2-202ENSMUST00000225183 823 ntBASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trub1Q8C0D0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gm23596-201ENSMUST00000104304 132 ntBASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gm3332-201ENSMUST00000189337 928 ntBASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gm5982-201ENSMUST00000196234 512 ntBASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gm43438-201ENSMUST00000198133 379 ntBASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gm45186-201ENSMUST00000206874 478 ntBASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trub1Q8C0D0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms