Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm26110-201ENSMUST00000083971 165 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm38317-201ENSMUST00000195564 343 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm10312-201ENSMUST00000078515 489 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trerf1Q8BXJ2 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trerf1Q8BXJ2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm24934-201ENSMUST00000103764 111 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm14109-201ENSMUST00000118814 309 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm15276-201ENSMUST00000145953 498 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm27046-201ENSMUST00000182160 463 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 AA914427-201ENSMUST00000193194 1166 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm44882-201ENSMUST00000205702 802 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm18056-201ENSMUST00000207670 568 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm18061-201ENSMUST00000208350 562 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm18063-201ENSMUST00000208529 568 ntBASIC12.52□□□□□ -0.41
Trerf1Q8BXJ2 Gm18052-201ENSMUST00000208750 559 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms