Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Gm43221-201ENSMUST00000197612 2071 ntBASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Gm16296-201ENSMUST00000159905 325 ntBASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Gm6722-201ENSMUST00000221586 390 ntBASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Prpf38bQ80SY5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gm22133-201ENSMUST00000102082 109 ntBASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gm12899-201ENSMUST00000120565 551 ntBASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gm37246-201ENSMUST00000192665 835 ntBASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gm18363-201ENSMUST00000221671 730 ntBASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Prpf38bQ80SY5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Prpf38bQ80SY5 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prpf38bQ80SY5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prpf38bQ80SY5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Prpf38bQ80SY5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prpf38bQ80SY5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Prpf38bQ80SY5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms