Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm37389-201ENSMUST00000194885 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pif1Q80SX8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pif1Q80SX8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm11956-201ENSMUST00000119525 512 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm22144-201ENSMUST00000157402 102 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm10752-201ENSMUST00000218348 729 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm5705-201ENSMUST00000066241 711 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Kng2-201ENSMUST00000039338 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.02□□□□□ -0.65
Pif1Q80SX8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pif1Q80SX8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms