Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Gm26461-201ENSMUST00000175064 290 ntBASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc2Q6PDG5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gm11960-201ENSMUST00000122068 925 ntBASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.76□□□□□ -0.21
Smarcc2Q6PDG5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm23200-201ENSMUST00000104379 132 ntBASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm12266-201ENSMUST00000120311 962 ntBASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm17040-202ENSMUST00000170597 889 ntBASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm19287-201ENSMUST00000203190 358 ntBASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc2Q6PDG5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smarcc2Q6PDG5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc2Q6PDG5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc2Q6PDG5 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcc2Q6PDG5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc2Q6PDG5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc2Q6PDG5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc2Q6PDG5 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc2Q6PDG5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms