Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp49Q6P9L4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm28937-201ENSMUST00000185413 695 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm29400-201ENSMUST00000187208 695 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm28686-201ENSMUST00000187404 609 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm28662-201ENSMUST00000188446 695 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm28251-201ENSMUST00000188835 695 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm37318-201ENSMUST00000194325 695 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm38117-201ENSMUST00000194653 939 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm38017-201ENSMUST00000194768 695 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm37287-201ENSMUST00000195449 695 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm37793-201ENSMUST00000195548 695 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm43002-201ENSMUST00000200310 155 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm6450-201ENSMUST00000200896 574 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm5363-201ENSMUST00000211927 938 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm270-201ENSMUST00000223010 976 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Usp49Q6P9L4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.16□□□□□ -0.3
Usp49Q6P9L4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms