Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Gm29640-201ENSMUST00000187972 278 ntBASIC12.62□□□□□ -0.39
Foxd4Q60688 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Gm45078-201ENSMUST00000205343 546 ntBASIC12.62□□□□□ -0.39
Foxd4Q60688 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Gm45880-201ENSMUST00000213041 853 ntBASIC12.62□□□□□ -0.39
Foxd4Q60688 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 AC120394.1-201ENSMUST00000217153 351 ntBASIC12.62□□□□□ -0.39
Foxd4Q60688 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.62□□□□□ -0.39
Foxd4Q60688 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Foxd4Q60688 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Foxd4Q60688 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Foxd4Q60688 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.62□□□□□ -0.39
Foxd4Q60688 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.62□□□□□ -0.39
Foxd4Q60688 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.62□□□□□ -0.39
Foxd4Q60688 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxd4Q60688 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.61□□□□□ -0.39
Foxd4Q60688 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Snord83b-201ENSMUST00000104546 94 ntBASIC12.61□□□□□ -0.39
Foxd4Q60688 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Foxd4Q60688 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC12.61□□□□□ -0.39
Foxd4Q60688 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.61□□□□□ -0.39
Foxd4Q60688 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.61□□□□□ -0.39
Foxd4Q60688 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Foxd4Q60688 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.61□□□□□ -0.39
Foxd4Q60688 Mir8109-201ENSMUST00000184375 117 ntBASIC12.61□□□□□ -0.39
Foxd4Q60688 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.61□□□□□ -0.39
Foxd4Q60688 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Foxd4Q60688 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.61□□□□□ -0.39
Foxd4Q60688 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.61□□□□□ -0.39
Foxd4Q60688 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Foxd4Q60688 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Foxd4Q60688 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.61□□□□□ -0.39
Foxd4Q60688 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.61□□□□□ -0.39
Foxd4Q60688 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxd4Q60688 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Foxd4Q60688 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Foxd4Q60688 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.6□□□□□ -0.39
Foxd4Q60688 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Foxd4Q60688 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Foxd4Q60688 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.6□□□□□ -0.39
Foxd4Q60688 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Foxd4Q60688 Gm13674-201ENSMUST00000121276 823 ntBASIC12.6□□□□□ -0.39
Foxd4Q60688 Gm2231-201ENSMUST00000125661 612 ntBASIC12.6□□□□□ -0.39
Foxd4Q60688 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.6□□□□□ -0.39
Foxd4Q60688 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.6□□□□□ -0.39
Foxd4Q60688 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxd4Q60688 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.6□□□□□ -0.39
Foxd4Q60688 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms