Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nr1h4Q60641 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nr1h4Q60641 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.25□□□□□ -0.61
Nr1h4Q60641 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Gm11439-201ENSMUST00000118598 409 ntBASIC11.25□□□□□ -0.61
Nr1h4Q60641 Gm14441-201ENSMUST00000121960 540 ntBASIC11.25□□□□□ -0.61
Nr1h4Q60641 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Gm13316-201ENSMUST00000140537 691 ntBASIC11.25□□□□□ -0.61
Nr1h4Q60641 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.25□□□□□ -0.61
Nr1h4Q60641 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.25□□□□□ -0.61
Nr1h4Q60641 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Nr1h4Q60641 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.24□□□□□ -0.61
Nr1h4Q60641 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.24□□□□□ -0.61
Nr1h4Q60641 Gm6114-201ENSMUST00000182472 968 ntBASIC11.24□□□□□ -0.61
Nr1h4Q60641 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.24□□□□□ -0.61
Nr1h4Q60641 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nr1h4Q60641 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms