Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm11700-201ENSMUST00000119409 403 ntBASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm8459-201ENSMUST00000162504 760 ntBASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm45118-201ENSMUST00000208928 825 ntBASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps54Q5SPW0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm13408-201ENSMUST00000119822 798 ntBASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm13935-201ENSMUST00000121859 798 ntBASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Mir8093-201ENSMUST00000185043 137 ntBASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm42997-202ENSMUST00000200321 985 ntBASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps54Q5SPW0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms