Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Gm42908-201ENSMUST00000197508 870 ntBASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Gm9102-201ENSMUST00000219250 465 ntBASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13aQ5H8C4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Gm15329-201ENSMUST00000121408 155 ntBASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Gm8643-201ENSMUST00000195228 625 ntBASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Gm42660-201ENSMUST00000197733 947 ntBASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13aQ5H8C4 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Vps13aQ5H8C4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Vps13aQ5H8C4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Vps13aQ5H8C4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Gm14148-201ENSMUST00000122433 1008 ntBASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Gm5254-201ENSMUST00000188353 977 ntBASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Gm18391-201ENSMUST00000217189 658 ntBASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Gm15528-201ENSMUST00000117821 864 ntBASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC11.33□□□□□ -0.6
Vps13aQ5H8C4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms