Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Urb1Q571H0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Urb1Q571H0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.89□□□□□ -0.67
Urb1Q571H0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Urb1Q571H0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.89□□□□□ -0.67
Urb1Q571H0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Urb1Q571H0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.89□□□□□ -0.67
Urb1Q571H0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Urb1Q571H0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Urb1Q571H0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Urb1Q571H0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Gm11949-201ENSMUST00000117640 372 ntBASIC10.88□□□□□ -0.67
Urb1Q571H0 Gm14942-201ENSMUST00000119642 336 ntBASIC10.88□□□□□ -0.67
Urb1Q571H0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.88□□□□□ -0.67
Urb1Q571H0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.88□□□□□ -0.67
Urb1Q571H0 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.88□□□□□ -0.67
Urb1Q571H0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Gm15003-201ENSMUST00000118884 446 ntBASIC10.88□□□□□ -0.67
Urb1Q571H0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Gm5700-201ENSMUST00000191483 989 ntBASIC10.88□□□□□ -0.67
Urb1Q571H0 Gm5714-201ENSMUST00000197343 566 ntBASIC10.88□□□□□ -0.67
Urb1Q571H0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Urb1Q571H0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Urb1Q571H0 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Urb1Q571H0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Urb1Q571H0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm14247-201ENSMUST00000120950 237 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm5257-201ENSMUST00000121823 790 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm19587-201ENSMUST00000191395 545 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm6390-201ENSMUST00000215034 589 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Urb1Q571H0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Urb1Q571H0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
Urb1Q571H0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm12948-201ENSMUST00000119406 682 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm24398-201ENSMUST00000157870 109 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 Gm4654-201ENSMUST00000183305 982 ntBASIC10.87□□□□□ -0.67
Urb1Q571H0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms