Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm23479-201ENSMUST00000158876 122 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm5529-201ENSMUST00000165691 891 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm7741-201ENSMUST00000181445 989 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm4891-201ENSMUST00000182279 912 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm44173-201ENSMUST00000204316 132 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm42402-201ENSMUST00000208341 1054 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Map1b-203ENSMUST00000223725 2669 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm9102-201ENSMUST00000219250 465 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 AC122356.2-201ENSMUST00000226962 820 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm4925-202ENSMUST00000168843 1561 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm14176-201ENSMUST00000121302 477 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm5845-201ENSMUST00000195812 796 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm2553-201ENSMUST00000215986 605 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 CT010505.2-201ENSMUST00000227918 998 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 AC123061.1-201ENSMUST00000228021 999 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm23908-201ENSMUST00000104599 132 ntBASIC10.51□□□□□ -0.73
Chd8Q09XV5 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC10.51□□□□□ -0.73
Chd8Q09XV5 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms