Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ebf1Q07802 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12□□□□□ -0.49
Ebf1Q07802 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12□□□□□ -0.49
Ebf1Q07802 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ebf1Q07802 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Ebf1Q07802 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Gm43984-201ENSMUST00000204572 2864 ntBASIC12□□□□□ -0.49
Ebf1Q07802 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.99□□□□□ -0.49
Ebf1Q07802 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.99□□□□□ -0.49
Ebf1Q07802 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Gm15352-201ENSMUST00000118696 270 ntBASIC11.99□□□□□ -0.49
Ebf1Q07802 Gm11675-201ENSMUST00000121873 832 ntBASIC11.99□□□□□ -0.49
Ebf1Q07802 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.99□□□□□ -0.49
Ebf1Q07802 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.99□□□□□ -0.49
Ebf1Q07802 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.99□□□□□ -0.49
Ebf1Q07802 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.99□□□□□ -0.49
Ebf1Q07802 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.99□□□□□ -0.49
Ebf1Q07802 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf1Q07802 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.99□□□□□ -0.49
Ebf1Q07802 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ebf1Q07802 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ebf1Q07802 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.98□□□□□ -0.49
Ebf1Q07802 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.98□□□□□ -0.49
Ebf1Q07802 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Ebf1Q07802 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.98□□□□□ -0.49
Ebf1Q07802 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.98□□□□□ -0.49
Ebf1Q07802 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.98□□□□□ -0.49
Ebf1Q07802 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.98□□□□□ -0.49
Ebf1Q07802 Gm23045-201ENSMUST00000175041 96 ntBASIC11.98□□□□□ -0.49
Ebf1Q07802 Gm27910-201ENSMUST00000185004 107 ntBASIC11.98□□□□□ -0.49
Ebf1Q07802 Gm42518-201ENSMUST00000196277 938 ntBASIC11.98□□□□□ -0.49
Ebf1Q07802 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.98□□□□□ -0.49
Ebf1Q07802 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.98□□□□□ -0.49
Ebf1Q07802 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.98□□□□□ -0.49
Ebf1Q07802 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.98□□□□□ -0.49
Ebf1Q07802 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ebf1Q07802 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf1Q07802 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms