Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Gm23272-201ENSMUST00000104053 129 ntBASIC13.37□□□□□ -0.27
GabpaQ00422 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Gm37981-201ENSMUST00000194280 535 ntBASIC13.37□□□□□ -0.27
GabpaQ00422 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.37□□□□□ -0.27
GabpaQ00422 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.37□□□□□ -0.27
GabpaQ00422 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.37□□□□□ -0.27
GabpaQ00422 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.37□□□□□ -0.27
GabpaQ00422 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
GabpaQ00422 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.36□□□□□ -0.27
GabpaQ00422 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GabpaQ00422 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GabpaQ00422 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.36□□□□□ -0.27
GabpaQ00422 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
GabpaQ00422 Mir1956-201ENSMUST00000157748 65 ntBASIC13.36□□□□□ -0.27
GabpaQ00422 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GabpaQ00422 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Gm38210-201ENSMUST00000191944 809 ntBASIC13.36□□□□□ -0.27
GabpaQ00422 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.36□□□□□ -0.27
GabpaQ00422 Gm42657-201ENSMUST00000201746 211 ntBASIC13.36□□□□□ -0.27
GabpaQ00422 Gm44158-201ENSMUST00000203881 505 ntBASIC13.36□□□□□ -0.27
GabpaQ00422 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.36□□□□□ -0.27
GabpaQ00422 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GabpaQ00422 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.36□□□□□ -0.27
GabpaQ00422 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.36□□□□□ -0.27
GabpaQ00422 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GabpaQ00422 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GabpaQ00422 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.36□□□□□ -0.27
GabpaQ00422 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GabpaQ00422 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GabpaQ00422 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GabpaQ00422 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GabpaQ00422 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GabpaQ00422 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.35□□□□□ -0.27
GabpaQ00422 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Gm11244-201ENSMUST00000121243 237 ntBASIC13.35□□□□□ -0.27
GabpaQ00422 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.35□□□□□ -0.27
GabpaQ00422 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.35□□□□□ -0.27
GabpaQ00422 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.35□□□□□ -0.27
GabpaQ00422 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.35□□□□□ -0.27
GabpaQ00422 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Gm2875-201ENSMUST00000211333 360 ntBASIC13.35□□□□□ -0.27
GabpaQ00422 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.35□□□□□ -0.27
GabpaQ00422 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GabpaQ00422 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms