Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Gm8566-201ENSMUST00000120174 465 ntBASIC10.52□□□□□ -0.73
H3f3aP84244 Gm12196-201ENSMUST00000120954 262 ntBASIC10.52□□□□□ -0.73
H3f3aP84244 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.52□□□□□ -0.73
H3f3aP84244 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.52□□□□□ -0.73
H3f3aP84244 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
H3f3aP84244 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Gm6450-201ENSMUST00000200896 574 ntBASIC10.52□□□□□ -0.73
H3f3aP84244 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Gm5363-201ENSMUST00000211927 938 ntBASIC10.52□□□□□ -0.73
H3f3aP84244 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.52□□□□□ -0.73
H3f3aP84244 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.52□□□□□ -0.73
H3f3aP84244 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.52□□□□□ -0.73
H3f3aP84244 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
H3f3aP84244 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.52□□□□□ -0.73
H3f3aP84244 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.52□□□□□ -0.73
H3f3aP84244 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.52□□□□□ -0.73
H3f3aP84244 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H3f3aP84244 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm23200-201ENSMUST00000104379 132 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Gm4909-201ENSMUST00000118749 794 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm25881-201ENSMUST00000157783 103 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
H3f3aP84244 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm28450-201ENSMUST00000187349 638 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Gm38117-201ENSMUST00000194653 939 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Gm38314-201ENSMUST00000195709 625 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm2965-201ENSMUST00000198365 343 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.51□□□□□ -0.73
H3f3aP84244 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
H3f3aP84244 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.51□□□□□ -0.73
H3f3aP84244 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H3f3aP84244 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms