Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm22885-201ENSMUST00000157410 107 ntBASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.49□□□□□ -0.73
Sf3b6P59708 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.49□□□□□ -0.73
Sf3b6P59708 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.49□□□□□ -0.73
Sf3b6P59708 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.49□□□□□ -0.73
Sf3b6P59708 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.49□□□□□ -0.73
Sf3b6P59708 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.49□□□□□ -0.73
Sf3b6P59708 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.48□□□□□ -0.73
Sf3b6P59708 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.48□□□□□ -0.73
Sf3b6P59708 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Gm11591-201ENSMUST00000120063 702 ntBASIC10.48□□□□□ -0.73
Sf3b6P59708 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Sf3b6P59708 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Gm42660-201ENSMUST00000197733 947 ntBASIC10.48□□□□□ -0.73
Sf3b6P59708 Gm43630-201ENSMUST00000201550 776 ntBASIC10.48□□□□□ -0.73
Sf3b6P59708 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.48□□□□□ -0.73
Sf3b6P59708 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b6P59708 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sf3b6P59708 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Sf3b6P59708 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm12164-201ENSMUST00000121695 551 ntBASIC10.47□□□□□ -0.73
Sf3b6P59708 Gm11960-201ENSMUST00000122068 925 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms