Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.15□□□□□ -0.62
Nup43P59235 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.15□□□□□ -0.62
Nup43P59235 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nup43P59235 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Nup43P59235 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Nup43P59235 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Nup43P59235 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nup43P59235 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.15□□□□□ -0.62
Nup43P59235 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nup43P59235 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Nup43P59235 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.14□□□□□ -0.63
Nup43P59235 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Nup43P59235 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nup43P59235 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nup43P59235 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nup43P59235 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.14□□□□□ -0.63
Nup43P59235 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Gm23200-201ENSMUST00000104379 132 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nup43P59235 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Nup43P59235 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Nup43P59235 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Gm14724-201ENSMUST00000118400 537 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Gm15207-201ENSMUST00000119259 442 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.14□□□□□ -0.63
Nup43P59235 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.14□□□□□ -0.63
Nup43P59235 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.14□□□□□ -0.63
Nup43P59235 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.14□□□□□ -0.63
Nup43P59235 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nup43P59235 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Gm8100-201ENSMUST00000182906 988 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Nup43P59235 Gm38117-201ENSMUST00000194653 939 ntBASIC11.14□□□□□ -0.63
Nup43P59235 AU022133-201ENSMUST00000200601 873 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Gm6450-201ENSMUST00000200896 574 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nup43P59235 Gm21811-201ENSMUST00000096485 930 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.14□□□□□ -0.63
Nup43P59235 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.14□□□□□ -0.63
Nup43P59235 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup43P59235 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nup43P59235 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.13□□□□□ -0.63
Nup43P59235 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nup43P59235 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nup43P59235 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nup43P59235 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.13□□□□□ -0.63
Nup43P59235 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.13□□□□□ -0.63
Nup43P59235 Gm11700-201ENSMUST00000119409 403 ntBASIC11.13□□□□□ -0.63
Nup43P59235 Gm8566-201ENSMUST00000120174 465 ntBASIC11.13□□□□□ -0.63
Nup43P59235 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.13□□□□□ -0.63
Nup43P59235 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.13□□□□□ -0.63
Nup43P59235 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nup43P59235 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms