Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm13408-201ENSMUST00000119822 798 ntBASIC11.93□□□□□ -0.5
Lhx3P50481 Gm13935-201ENSMUST00000121859 798 ntBASIC11.93□□□□□ -0.5
Lhx3P50481 Gm7666-201ENSMUST00000146631 819 ntBASIC11.93□□□□□ -0.5
Lhx3P50481 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.93□□□□□ -0.5
Lhx3P50481 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx3P50481 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx3P50481 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.93□□□□□ -0.5
Lhx3P50481 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Lhx3P50481 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Lhx3P50481 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.93□□□□□ -0.5
Lhx3P50481 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx3P50481 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.93□□□□□ -0.5
Lhx3P50481 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lhx3P50481 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lhx3P50481 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.92□□□□□ -0.5
Lhx3P50481 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.92□□□□□ -0.5
Lhx3P50481 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Gm26047-201ENSMUST00000157308 113 ntBASIC11.92□□□□□ -0.5
Lhx3P50481 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Lhx3P50481 Gm18367-201ENSMUST00000176139 600 ntBASIC11.92□□□□□ -0.5
Lhx3P50481 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.92□□□□□ -0.5
Lhx3P50481 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.92□□□□□ -0.5
Lhx3P50481 Gm26047-202ENSMUST00000198840 115 ntBASIC11.92□□□□□ -0.5
Lhx3P50481 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Gm18065-201ENSMUST00000221395 526 ntBASIC11.92□□□□□ -0.5
Lhx3P50481 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.92□□□□□ -0.5
Lhx3P50481 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Gm4978-201ENSMUST00000071565 801 ntBASIC11.92□□□□□ -0.5
Lhx3P50481 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx3P50481 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lhx3P50481 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx3P50481 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx3P50481 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx3P50481 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.91□□□□□ -0.5
Lhx3P50481 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx3P50481 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.91□□□□□ -0.5
Lhx3P50481 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.91□□□□□ -0.5
Lhx3P50481 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx3P50481 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx3P50481 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx3P50481 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Lhx3P50481 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx3P50481 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx3P50481 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms