Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Rfx3P48381 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rfx3P48381 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.66□□□□□ -0.7
Rfx3P48381 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.66□□□□□ -0.7
Rfx3P48381 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rfx3P48381 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.66□□□□□ -0.7
Rfx3P48381 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfx3P48381 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfx3P48381 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfx3P48381 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfx3P48381 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfx3P48381 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfx3P48381 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.66□□□□□ -0.7
Rfx3P48381 Gm15547-201ENSMUST00000122152 333 ntBASIC10.66□□□□□ -0.7
Rfx3P48381 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.66□□□□□ -0.7
Rfx3P48381 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.66□□□□□ -0.7
Rfx3P48381 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Rfx3P48381 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.66□□□□□ -0.7
Rfx3P48381 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.66□□□□□ -0.7
Rfx3P48381 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.66□□□□□ -0.7
Rfx3P48381 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.66□□□□□ -0.7
Rfx3P48381 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.66□□□□□ -0.7
Rfx3P48381 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.66□□□□□ -0.7
Rfx3P48381 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rfx3P48381 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.66□□□□□ -0.7
Rfx3P48381 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.66□□□□□ -0.7
Rfx3P48381 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Rfx3P48381 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfx3P48381 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.65□□□□□ -0.7
Rfx3P48381 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.65□□□□□ -0.7
Rfx3P48381 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Rfx3P48381 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.65□□□□□ -0.7
Rfx3P48381 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.65□□□□□ -0.7
Rfx3P48381 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.65□□□□□ -0.7
Rfx3P48381 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Rfx3P48381 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.7
Rfx3P48381 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.65□□□□□ -0.7
Rfx3P48381 Gm31256-201ENSMUST00000194705 506 ntBASIC10.65□□□□□ -0.7
Rfx3P48381 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.65□□□□□ -0.7
Rfx3P48381 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.65□□□□□ -0.7
Rfx3P48381 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rfx3P48381 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rfx3P48381 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rfx3P48381 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.65□□□□□ -0.7
Rfx3P48381 Olfr582-201ENSMUST00000098212 960 ntBASIC10.65□□□□□ -0.7
Rfx3P48381 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rfx3P48381 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms