Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Gm7781-201ENSMUST00000117258 788 ntBASIC12.14□□□□□ -0.47
HttP42859 Gm14997-201ENSMUST00000119232 636 ntBASIC12.14□□□□□ -0.47
HttP42859 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC12.14□□□□□ -0.47
HttP42859 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC12.14□□□□□ -0.47
HttP42859 Gm37688-201ENSMUST00000195195 465 ntBASIC12.14□□□□□ -0.47
HttP42859 Gm45893-201ENSMUST00000211899 247 ntBASIC12.14□□□□□ -0.47
HttP42859 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC12.14□□□□□ -0.47
HttP42859 AC129017.2-201ENSMUST00000226118 1284 ntBASIC12.14□□□□□ -0.47
HttP42859 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC12.14□□□□□ -0.47
HttP42859 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Gm38034-201ENSMUST00000193915 2069 ntBASIC12.14□□□□□ -0.47
HttP42859 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.14□□□□□ -0.47
HttP42859 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
HttP42859 Gm22662-201ENSMUST00000175290 256 ntBASIC12.14□□□□□ -0.47
HttP42859 Gm40332-201ENSMUST00000199847 938 ntBASIC12.14□□□□□ -0.47
HttP42859 Gm45745-201ENSMUST00000211447 1180 ntBASIC12.14□□□□□ -0.47
HttP42859 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.14□□□□□ -0.47
HttP42859 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.14□□□□□ -0.47
HttP42859 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HttP42859 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
HttP42859 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
HttP42859 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 CU025215.1-201ENSMUST00000222986 603 ntBASIC12.13□□□□□ -0.47
HttP42859 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
HttP42859 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
HttP42859 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HttP42859 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HttP42859 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
HttP42859 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.13□□□□□ -0.47
HttP42859 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.13□□□□□ -0.47
HttP42859 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HttP42859 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HttP42859 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC12.13□□□□□ -0.47
HttP42859 Gm25288-201ENSMUST00000122800 265 ntBASIC12.13□□□□□ -0.47
HttP42859 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC12.13□□□□□ -0.47
HttP42859 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HttP42859 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HttP42859 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HttP42859 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.13□□□□□ -0.47
HttP42859 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HttP42859 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HttP42859 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.12□□□□□ -0.47
HttP42859 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Gm8725-201ENSMUST00000221829 1333 ntBASIC12.12□□□□□ -0.47
HttP42859 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm12961-201ENSMUST00000120507 1050 ntBASIC12.12□□□□□ -0.47
HttP42859 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC12.12□□□□□ -0.47
HttP42859 Gm17782-201ENSMUST00000174345 880 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm21577-201ENSMUST00000190823 697 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm20802-201ENSMUST00000190832 698 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm38349-201ENSMUST00000195732 462 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm42821-201ENSMUST00000199771 489 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.12□□□□□ -0.47
HttP42859 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.12□□□□□ -0.47
HttP42859 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms