Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm13392-201ENSMUST00000117708 150 ntBASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm1335-201ENSMUST00000121653 386 ntBASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm16379-201ENSMUST00000161469 348 ntBASIC10.16□□□□□ -0.78
Slc6a1P31648 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm27243-201ENSMUST00000183964 521 ntBASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm8762-201ENSMUST00000193486 339 ntBASIC10.16□□□□□ -0.78
Slc6a1P31648 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm6013-201ENSMUST00000212264 699 ntBASIC10.16□□□□□ -0.78
Slc6a1P31648 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.16□□□□□ -0.78
Slc6a1P31648 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.16□□□□□ -0.78
Slc6a1P31648 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.16□□□□□ -0.78
Slc6a1P31648 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm22121-201ENSMUST00000175148 54 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.15□□□□□ -0.78
Slc6a1P31648 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm42693-201ENSMUST00000196779 631 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm42627-201ENSMUST00000197347 224 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm10268-201ENSMUST00000085340 555 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.15□□□□□ -0.78
Slc6a1P31648 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Slc6a1P31648 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Slc6a1P31648 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.15□□□□□ -0.78
Slc6a1P31648 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Slc6a1P31648 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms