Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Surf1P09925 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.35□□□□□ -0.27
Surf1P09925 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Surf1P09925 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Surf1P09925 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Surf1P09925 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Surf1P09925 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Surf1P09925 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Surf1P09925 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Surf1P09925 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Surf1P09925 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Surf1P09925 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Surf1P09925 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Surf1P09925 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Surf1P09925 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.34□□□□□ -0.27
Surf1P09925 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Surf1P09925 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13.34□□□□□ -0.27
Surf1P09925 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.34□□□□□ -0.27
Surf1P09925 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Gm14028-201ENSMUST00000117434 479 ntBASIC13.34□□□□□ -0.27
Surf1P09925 Gm7722-201ENSMUST00000120646 741 ntBASIC13.34□□□□□ -0.27
Surf1P09925 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.34□□□□□ -0.27
Surf1P09925 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.34□□□□□ -0.27
Surf1P09925 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Surf1P09925 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.34□□□□□ -0.27
Surf1P09925 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Surf1P09925 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Gm27341-201ENSMUST00000183570 106 ntBASIC13.34□□□□□ -0.27
Surf1P09925 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.34□□□□□ -0.27
Surf1P09925 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Surf1P09925 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Surf1P09925 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.34□□□□□ -0.27
Surf1P09925 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Surf1P09925 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC13.34□□□□□ -0.27
Surf1P09925 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Surf1P09925 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Surf1P09925 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Surf1P09925 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Surf1P09925 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Surf1P09925 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Surf1P09925 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Surf1P09925 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Surf1P09925 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Gm14208-201ENSMUST00000119645 678 ntBASIC13.33□□□□□ -0.28
Surf1P09925 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.33□□□□□ -0.28
Surf1P09925 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.33□□□□□ -0.28
Surf1P09925 Gm5616-201ENSMUST00000165252 384 ntBASIC13.33□□□□□ -0.28
Surf1P09925 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Gm8741-201ENSMUST00000174736 384 ntBASIC13.33□□□□□ -0.28
Surf1P09925 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Surf1P09925 Gm28071-201ENSMUST00000190355 478 ntBASIC13.33□□□□□ -0.28
Surf1P09925 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Surf1P09925 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Gm5455-201ENSMUST00000058710 715 ntBASIC13.33□□□□□ -0.28
Surf1P09925 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Surf1P09925 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Surf1P09925 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.33□□□□□ -0.28
Surf1P09925 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Surf1P09925 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Surf1P09925 Gm18262-201ENSMUST00000222560 1946 ntBASIC13.33□□□□□ -0.28
Surf1P09925 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms