Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf13O54965 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf13O54965 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf13O54965 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf13O54965 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf13O54965 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf13O54965 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf13O54965 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.67□□□□□ -0.7
Rnf13O54965 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rnf13O54965 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Rnf13O54965 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Mir1247-201ENSMUST00000116706 82 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Gm13226-201ENSMUST00000117838 404 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Gm11700-201ENSMUST00000119409 403 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Gm15824-201ENSMUST00000119516 955 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Gm14832-201ENSMUST00000121289 322 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Gm24845-201ENSMUST00000158034 109 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.67□□□□□ -0.7
Rnf13O54965 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rnf13O54965 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rnf13O54965 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.67□□□□□ -0.7
Rnf13O54965 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Rnf13O54965 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rnf13O54965 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.67□□□□□ -0.7
Rnf13O54965 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Rnf13O54965 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.67□□□□□ -0.7
Rnf13O54965 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf13O54965 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Rnf13O54965 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rnf13O54965 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rnf13O54965 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rnf13O54965 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Gm11439-201ENSMUST00000118598 409 ntBASIC10.66□□□□□ -0.7
Rnf13O54965 Gm5419-201ENSMUST00000119301 527 ntBASIC10.66□□□□□ -0.7
Rnf13O54965 Gm4986-201ENSMUST00000119731 549 ntBASIC10.66□□□□□ -0.7
Rnf13O54965 Gm12164-201ENSMUST00000121695 551 ntBASIC10.66□□□□□ -0.7
Rnf13O54965 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.66□□□□□ -0.7
Rnf13O54965 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.66□□□□□ -0.7
Rnf13O54965 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.66□□□□□ -0.7
Rnf13O54965 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.66□□□□□ -0.7
Rnf13O54965 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.66□□□□□ -0.7
Rnf13O54965 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rnf13O54965 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf13O54965 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms