Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Gm15370-201ENSMUST00000117158 253 ntBASIC13.99□□□□□ -0.17
Smarce1O54941 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.99□□□□□ -0.17
Smarce1O54941 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.99□□□□□ -0.17
Smarce1O54941 Gm43433-201ENSMUST00000196573 481 ntBASIC13.99□□□□□ -0.17
Smarce1O54941 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.99□□□□□ -0.17
Smarce1O54941 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smarce1O54941 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smarce1O54941 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.99□□□□□ -0.17
Smarce1O54941 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smarce1O54941 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarce1O54941 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarce1O54941 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.98□□□□□ -0.17
Smarce1O54941 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarce1O54941 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.98□□□□□ -0.17
Smarce1O54941 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Smarce1O54941 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.98□□□□□ -0.17
Smarce1O54941 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.98□□□□□ -0.17
Smarce1O54941 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.98□□□□□ -0.17
Smarce1O54941 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarce1O54941 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smarce1O54941 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Smarce1O54941 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarce1O54941 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.97□□□□□ -0.17
Smarce1O54941 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.97□□□□□ -0.17
Smarce1O54941 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Smarce1O54941 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarce1O54941 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.97□□□□□ -0.17
Smarce1O54941 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarce1O54941 Gm807-202ENSMUST00000224929 408 ntBASIC13.97□□□□□ -0.17
Smarce1O54941 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.97□□□□□ -0.17
Smarce1O54941 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smarce1O54941 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.97□□□□□ -0.17
Smarce1O54941 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.97□□□□□ -0.17
Smarce1O54941 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Smarce1O54941 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smarce1O54941 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.97□□□□□ -0.17
Smarce1O54941 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.97□□□□□ -0.17
Smarce1O54941 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarce1O54941 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarce1O54941 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smarce1O54941 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Gm6963-201ENSMUST00000147879 379 ntBASIC13.96□□□□□ -0.17
Smarce1O54941 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.96□□□□□ -0.17
Smarce1O54941 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.96□□□□□ -0.17
Smarce1O54941 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.96□□□□□ -0.17
Smarce1O54941 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.96□□□□□ -0.17
Smarce1O54941 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms