Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.8□□□□□ -0.36
Clk2O35491 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.8□□□□□ -0.36
Clk2O35491 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.8□□□□□ -0.36
Clk2O35491 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.8□□□□□ -0.36
Clk2O35491 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 Gm4978-201ENSMUST00000071565 801 ntBASIC12.8□□□□□ -0.36
Clk2O35491 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.8□□□□□ -0.36
Clk2O35491 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.8□□□□□ -0.36
Clk2O35491 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Clk2O35491 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.8□□□□□ -0.36
Clk2O35491 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clk2O35491 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.8□□□□□ -0.36
Clk2O35491 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Clk2O35491 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Clk2O35491 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Clk2O35491 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clk2O35491 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Clk2O35491 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.79□□□□□ -0.36
Clk2O35491 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Clk2O35491 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Clk2O35491 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clk2O35491 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Gm11700-201ENSMUST00000119409 403 ntBASIC12.79□□□□□ -0.36
Clk2O35491 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.79□□□□□ -0.36
Clk2O35491 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.79□□□□□ -0.36
Clk2O35491 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.79□□□□□ -0.36
Clk2O35491 Gm27910-201ENSMUST00000185004 107 ntBASIC12.79□□□□□ -0.36
Clk2O35491 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clk2O35491 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.79□□□□□ -0.36
Clk2O35491 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.79□□□□□ -0.36
Clk2O35491 Gm8574-201ENSMUST00000203207 924 ntBASIC12.79□□□□□ -0.36
Clk2O35491 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.79□□□□□ -0.36
Clk2O35491 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Clk2O35491 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.79□□□□□ -0.36
Clk2O35491 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.79□□□□□ -0.36
Clk2O35491 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.79□□□□□ -0.36
Clk2O35491 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.79□□□□□ -0.36
Clk2O35491 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clk2O35491 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clk2O35491 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clk2O35491 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Clk2O35491 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clk2O35491 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.78□□□□□ -0.36
Clk2O35491 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.78□□□□□ -0.36
Clk2O35491 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Clk2O35491 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.78□□□□□ -0.36
Clk2O35491 Gm12208-201ENSMUST00000122004 163 ntBASIC12.78□□□□□ -0.36
Clk2O35491 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.78□□□□□ -0.36
Clk2O35491 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Clk2O35491 Gm9645-201ENSMUST00000197131 792 ntBASIC12.78□□□□□ -0.36
Clk2O35491 Gm43520-201ENSMUST00000197996 164 ntBASIC12.78□□□□□ -0.36
Clk2O35491 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.78□□□□□ -0.36
Clk2O35491 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms