Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.3□□□□□ -0.44
Ebf3O08791 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Ebf3O08791 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf3O08791 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf3O08791 Gm4726-201ENSMUST00000135604 736 ntBASIC12.3□□□□□ -0.44
Ebf3O08791 Gm6019-201ENSMUST00000148369 736 ntBASIC12.3□□□□□ -0.44
Ebf3O08791 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.3□□□□□ -0.44
Ebf3O08791 Gm22144-201ENSMUST00000157402 102 ntBASIC12.3□□□□□ -0.44
Ebf3O08791 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.3□□□□□ -0.44
Ebf3O08791 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.3□□□□□ -0.44
Ebf3O08791 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.3□□□□□ -0.44
Ebf3O08791 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.3□□□□□ -0.44
Ebf3O08791 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.3□□□□□ -0.44
Ebf3O08791 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ebf3O08791 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.29□□□□□ -0.44
Ebf3O08791 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ebf3O08791 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.29□□□□□ -0.44
Ebf3O08791 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ebf3O08791 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ebf3O08791 Gm11956-201ENSMUST00000119525 512 ntBASIC12.29□□□□□ -0.44
Ebf3O08791 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.29□□□□□ -0.44
Ebf3O08791 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.29□□□□□ -0.44
Ebf3O08791 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.29□□□□□ -0.44
Ebf3O08791 Gm9463-201ENSMUST00000206707 601 ntBASIC12.29□□□□□ -0.44
Ebf3O08791 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.29□□□□□ -0.44
Ebf3O08791 Gm10752-201ENSMUST00000218348 729 ntBASIC12.29□□□□□ -0.44
Ebf3O08791 Gm5705-201ENSMUST00000066241 711 ntBASIC12.29□□□□□ -0.44
Ebf3O08791 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.29□□□□□ -0.44
Ebf3O08791 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ebf3O08791 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.29□□□□□ -0.44
Ebf3O08791 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ebf3O08791 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ebf3O08791 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ebf3O08791 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf3O08791 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ebf3O08791 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Gm11628-201ENSMUST00000117568 171 ntBASIC12.28□□□□□ -0.44
Ebf3O08791 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Gm8194-201ENSMUST00000159783 859 ntBASIC12.28□□□□□ -0.44
Ebf3O08791 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.28□□□□□ -0.44
Ebf3O08791 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf3O08791 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Gm45575-201ENSMUST00000210283 548 ntBASIC12.28□□□□□ -0.44
Ebf3O08791 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ebf3O08791 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf3O08791 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ebf3O08791 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.28□□□□□ -0.44
Ebf3O08791 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms