Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Gm13019-201ENSMUST00000120000 276 ntBASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Gm22146-201ENSMUST00000157397 288 ntBASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Gm44106-201ENSMUST00000203153 1599 ntBASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc180J3QNE4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc180J3QNE4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Gm14398-201ENSMUST00000117287 1073 ntBASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Gm8111-201ENSMUST00000117659 987 ntBASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Gm9507-202ENSMUST00000180157 654 ntBASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Gm13135-201ENSMUST00000117628 3121 ntBASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Gm11578-201ENSMUST00000118530 459 ntBASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc180J3QNE4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Gm26272-201ENSMUST00000179241 132 ntBASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC21.17■□□□□ 0.98
Ccdc180J3QNE4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 AC154361.2-201ENSMUST00000224747 943 ntBASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Gm5171-201ENSMUST00000214944 1415 ntBASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms